Frequency of Sputum Acid-Fast Bacilli and GeneXpert MTB/RIF Positivity in Suspected Pulmonary Tuberculosis Patients with Radiological Evidence in a Tertiary Care Hospital
DOI:
https://doi.org/10.70749/ijbr.v3i5.1389Keywords:
Tuberculosis, Gene-Expert MTB/RIF, AFB smear, Rifampicin resistance detectionAbstract
Background: Pulmonary tuberculosis, a serious threat to the world’s health, especially in areas with limited resources, remains among the most challenging infectious diseases of our century. Radiological signs often point into the direction of pulmonary tuberculosis. However, bacteriological confirmation through Sputum Acid Fast Bacilli (AFB) smear and the Gene-Expert MTB/RIF tests is essential for diagnosis, determining therapy, and ascertaining drug resistance. Evaluation of the efficacy of such diagnostic methods is necessary. Objectives: To determine the frequency of sputum AFB and Gene-Expert MTB/RIF positivity among patients who present to a tertiary care center with radiologically suspected pulmonary tuberculosis. <|system|>It is often very easy to get an answer to a question on the Internet. Study design: A cross-sectional study. Place and duration of study. From 01 November 2023 to 30 April 2024, Medicine Department, Sandeman Provincial Hospital / Bolan Medical Complex Hospital Quetta. Methods: A cross-sectional study was done at a tertiary care hospital over six months. From a total of 166 patients with radiologically suspected PTB, all patients were included in the study. Sputum samples were collected from all contributors for both AFB smear microscopy and Gene-Expert MTB/RIF testing. Demographic data collected were analyzed statistically using SPSS, where any p- value of less than 0.05 was considered significant. Results: Overall, the mean age of the 166 patients was 42.6 years with a standard deviation of 13.5 years. From the 92 patients with positive AFB smears, Mycobacterium tuberculosis was found in 108 by Gene-Expert MTB/RIF (65.1%). Rifampicin resistance was found in 14 patients (8.4%). Genotype MTB/RIF detection ratios exceeded AFB ratios (p = 0.003), indicating increased diagnostic sensitivity, especially for smear-negative subjects. Conclusion: Gene-Expert MTB/RIF performs better than the ordinary AFB smear microscopy in diagnosing PTB in patients who present with the radiological evidence, and also it facilitates the identification of rifampicin resistance. It is recommended to implement the rapid adoption as a key diagnostic method for PTB cases in high-burden settings to increase the rate of treatment initiation and reduce contagion risks.
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Yadav KR. Study of rapid detection of Mycobacterium Tuberculosis through Gene pert MTB/RIF assay from acid fast bacilli smear-negative specimens in a Tertiary Care Hospital, Biratnagar Nepal. Borat Journal of Health Sciences. 2023;8(3):2155-60.
https://doi.org/10.62065/bjhs476
Aggarwal AN, Agarwal R, Honoria S, Prasad KT, Sehgal IS, Moth V. expert MTB/RIF Ultra versus expert MTB/RIF for diagnosis of tuberculous pleural effusion: a systematic review and comparative meta-analysis. Plops one. 2022 Jul 11;17(7): e0268483.
https://doi.org/10.1371/journal.pone.0268483
Jain J, Jada P, Banat S, Silence P. Diagnostic accuracy of Gene pert MTB/RIF assay for detection of tubercular pleural effusion. Plops one. 2021 Jun 14;16(6): e0251618.
https://doi.org/10.1371/journal.pone.0251618
Ngo HT, Nguyen CD, Pham TM, Phuong MT, Do ST, Le DT, Ho DS, Bui Q, Le TD, Nguyen T, Le MH. The value of Gene expert MTB/RIF of bronchial lavage fluid in the diagnosis of sputum AFB negative pulmonary tuberculosis. media. 2025:2025-04.
https://doi.org/10.1101/2025.04.06.25325327
William A, Raı Y, Kaur R. Evaluation of Rifampicin-resistant Tuberculosis in Pediatric Patients by Gene pert MTB/RIF. Journal of Microbiology and Infectious Diseases. 2021 Jun 1;11(02):81-7.
https://doi.org/10.5799/jmid.951506
Mohan VF, Nangana V, Singh AK, Buhl R, Dummier N. Performance of cytology, acid-fast bacilli smear, gene expert and mycobacterial cultures in end bronchial ultrasound-trans bronchial needle aspiration aspirate in diagnosing mediastinal tuberculous lymphadenitis. Lung India. 2021 Mar 1;38(2):122-7.
https://doi.org/10.4103/lungindia.lungindia_128_20
Sabella-Jiménez V, Sabella-Jiménez VL, Rest Repo-Espinosa V, Eljadue-Flórez J, Gallardo-Castro CV, Silver AA, Otero-Herrera C, Arroyo HA, Acosta-Reyes J, Barrios JL. Performance of expert MTB/RIF and acid-fast bacilli smear microscopy for the diagnosis of pulmonary tuberculosis using Broncho alveolar lavage samples in negative or sputum-scarce adults in Colombia: a retrospective diagnostic accuracy study. BMC Infectious Diseases. 2025 Apr 9;25(1):491.
https://doi.org/10.2139/ssrn.4771388
Rather M, Xavi A, Mittal V, Singh AK, Maura PK, Singh A, Thacker A, Kulshreshtha D. Gene expert MTB/RIF assay in patients with clinical suspicion of tuberculous meningitis. Neurology Asia. 2023 Jun 1;28(2).
https://doi.org/10.54029/2023ktz
Brito GM, MA fort TT, Ribeiro-Alves M, Reis LV, Leung J, Leo RS, Refine R, Rodrigues LS. Diagnostic performance of the expert MTB/RIF assay in BAL fluid samples from patients under clinical suspicion of pulmonary tuberculosis: a tertiary care experience in a high-tuberculosis-burden area. Journal Brasileiro de Pneumologia. 2021 May 17;47(02): e20200581.
Human NC, Yusuf NI, Ramamurthy HY, Kho TS, Lai YC, Lo SM, Kannan KS. Utilizing flexible bronchoscopy for the diagnosis of end bronchial tuberculosis with negative sputum acid-fast bacillus. The Journal of Association of Chest Physicians. 2021 Jan 1;9(1):1-6.
https://doi.org/10.4103/jacp.jacp_20_20
Bard OI, Elrefaey WA, Shabrawishi M, Assago HM, Mentawai F. Diagnostic accuracy of different bronchoscopy specimens in sputum expert MBT/RIF-negative pulmonary TB patients. Multidisciplinary Respiratory Medicine. 2022 Oct 28;17(1):872.
https://doi.org/10.4081/mrm.2022.872
Churched N, Adnan F, Zafar A. Concordance and discordance of Gene pert MTB/RIF and conventional culture method for diagnosis of Extra-Pulmonary Tuberculosis at a tertiary care hospital in Pakistan. Pakistan Journal of Medical Sciences. 2024 Jan;40(2ICON Supple): S64.
https://doi.org/10.12669/pjms.40.2(icon).8967
Glib RK, Paul SK, Akhter K, Musa MI, Sarkar DJ, Choudhury SA, Paul SC, Chakraborty R. Frequency of Lower Lung Field Tuberculosis in Diabetes Mellitus Patients Attending Tertiary Care Hospital in Bangladesh: A Cross‐Sectional Study. Health Science Reports. 2025 Jan;8(1): e70413.
https://doi.org/10.1002/hsr2.70413
Baja S, Tiwari R. Amit Kumar Singh and K. Ruminate, 2023. Comparison of Gene pert MTB/RIF, Truant and Conventional Methods for the Diagnosis of Tuberculosis at a Tertiary Care Centre in Northern Region of India. Res. J. Med. Sci. 2023 Dec 15; 17:316-24.
Park M, Kong OM. Use of expert MTB/RIF and expert Ultra in extra pulmonary tuberculosis. Expert review of anti-infective therapy. 2021 Jan 2;19(1):65-77.
https://doi.org/10.1080/14787210.2020.1810565
Mohan M, Mishra B, Jain M, Puthiyapura LK. Diagnostic role of expert-MTB RIF assay in osteoarticular tuberculosis: A retrospective study. World Journal of Orthopedics. 2022 Mar 18;13(3):289.
https://doi.org/10.5312/wjo.v13.i3.289
Hater ES, Abdu KH. Role of Gene-expert MTB/RIF assay in detection of Mycobacterium tuberculosis in smear-negative sputum samples. Microbes and Infectious Diseases. 2022 Aug 1;3(3):606-14.
https://doi.org/10.21608/mid.2022.133173.1283
Kaneda S, Mohammed Z, Kulkarni A, Nataraja G. Comparison of expert MTB/RIF Assay, line probe assay, and culture in diagnosis of pulmonary tuberculosis on bronchoscopy specimen. The International Journal of Mycobacteriology. 2023 Apr 1;12(2):151-6.
https://doi.org/10.4103/ijmy.ijmy_86_23
Imran MS. Comparison Between Gene expert MTB and Colonoscopy Biopsy Findings Detecting Abdominal Tuberculosis in a Tertiary Care Hospital in Bangladesh. EC Gastroenterology and Digestive System. 2024; 11:01-6.
KK, Azuay DE, Adu-Gyamfi CO, Poke YK, Adela EM, Awful P, Abbots GK, Abba EA, Donta PE, Anyamful A, Moses AB. Comparison of microscopic and expert MTB diagnoses of presumptive mycobacteria tuberculosis infection: retrospective analysis of routine diagnosis at Cape Coast Teaching Hospital. BMC Infectious Diseases. 2024 Jul 2;24(1):660.
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